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Operator
Good day, ladies and gentlemen, and welcome to the Natural Grocers Third Quarter Fiscal Year 2018 Earnings Call. (Operator Instructions) As a reminder, today's call is being recorded. And now I'd like to turn the conference over to Mr. David Colson, Vice President and Treasurer for Natural Grocers. Mr. Colson, you may begin.
David Colson - VP & Treasurer
Good afternoon, everyone, and thank you for joining us for the Natural Grocers by Vitamin Cottage Third Quarter Fiscal Year 2018 Earnings Conference Call. On the call with me today are Kemper Isely, Co-President; and Todd Dissinger, Chief Financial Officer.
As a reminder, all statements made on this conference call, other than statements of historical fact, are forward-looking statements. All forward-looking statements are based on current expectations and assumptions that are subject to risks and uncertainties. Actual results could differ materially from those described in the forward-looking statements due to a variety of factors, including the risks detailed in the company's most recently filed Forms 10-Q and 10-K. The company undertakes no obligation to update forward-looking statements.
Today's press release is available on the company's website, and recording of this call will be available on the website at investors.naturalgrocers.com. Now I will turn the call over to Kemper.
Kemper Isely - Chairman & Co-President
Thank you, David, and good afternoon, everyone. It is my pleasure to discuss our strong third quarter results with you today. We have worked hard to improve both sales, trends and profit margins; and our performance reflects those efforts. The third quarter marks our fifth consecutive quarter of positive daily average comparable store sales, with comps up 5.2% and mature store comes up 2.3%. As we anticipated, the year-over-year gross margin and investment in our pricing and promotional strategies significantly decreased during the third quarter. This, along with strong store expense leverage, drove improved operating margins and higher earnings per share. As I will discuss in a moment, we are increasing our fiscal 2018 comp guidance and raising the low end of our earnings per share outlook.
We firmly believe that our sales momentum has been driven by the success of our marketing, promotional efforts and price investments, coupled with our unwavering focus on our core values. We believe it is our core values that resonate most with our customers and differentiate us from our competition. Our marketing and promotions have successfully emphasized our industry-leading product standards, delivered at an affordable price. We believe the formula we have developed will continue to deliver positive sales momentum while moderating the impact to gross margin and leading to enhanced profitability.
With that, let me turn the call over to Todd to discuss our financial results.
Todd Dissinger - CFO
Thank you very much, Kemper, and good afternoon, everyone. During the third quarter of fiscal 2018, net sales increased 9.5% to $213.1 million and, as Kemper mentioned, daily average comparable store sales increased 5.2%. The comp increase was driven by a 4.0% increase in daily average transaction count and a 1.1% increase in average transaction size.
The quarter's comp increased came despite a more challenging comp comparison and the promotional investments we began in the third quarter of last year. On a 2-year stacked basis, the third quarter comp remained consistent with the second quarter, while our incremental investments in gross margin moderated. We believe this confirms our ability to retain our traffic and basket gains while moderating our incremental investment in gross margin.
Gross profit margin declined approximately 40 basis points to 26.7% due to a lower product margin. Product margin, when compared to the prior year period, was impacted by both sales mix, given the strong comp in grocery, and our promotional and pricing initiatives. Recall that we generate a higher gross margin in supplements and body care than in grocery, and our promotional and pricing efforts have been focused primarily on grocery, which has impacted our sales mix and thus our gross margin.
The year-over-year decline in gross margin also continued to improve sequentially. The 40 basis point decline during the third quarter compares to 120 and 215 basis point declines in the second and first quarters of fiscal 2018, respectively.
Store expenses as a percentage of sales declined approximately 100 basis points to 22.1% during the third quarter compared to the prior year period. The decline in store expenses as a percentage of sales was primarily driven by leverage on the strong comp sales.
Preopening and relocation expenses declined $500,000 year-over-year due to the reduced number of new store openings as well as the timing of openings and relocations. We opened 2 new stores and relocated 1 store during the third quarter of fiscal 2018 compared to opening 5 new stores and no relocations in the third quarter of fiscal 2017.
The moderated gross margin decline, along with good leverage on store expenses and reduced preopening and relocation expenses, led to a 90 basis point improvement in operating margin during the third quarter.
Our effective tax rate for federal and state income taxes for the third quarter of fiscal 2018 was 23.1%, which compares to 25.5% in the third quarter of fiscal 2017, reflecting the new federal corporate income tax rate.
Net income increased 233% to $2 million, with diluted earnings per share of $0.09 in the third quarter of fiscal 2018 compared to $0.03 in the third quarter of last year. EBITDA was $11.1 million in the third quarter of fiscal 2018, up 20.7% compared to $9.2 million in the third quarter of fiscal 2017.
During the first 9 months of fiscal 2018, we generated cash from operations of $30.3 million and invested $16.7 million in capital expenditures. In addition to supporting our new store growth, we reduced the outstanding balance of our revolving credit facility by $3.3 million during the third quarter and have reduced the balance by $12.1 million during the first 9 months of fiscal 2018.
Now I will turn the call back to Kemper to discuss unit development and guidance.
Kemper Isely - Chairman & Co-President
Thank you, Todd. During the third quarter, we opened 2 new stores and relocated 1 store. Thus far, during the fourth quarter of fiscal 2018, we have relocated 1 store in Colorado. We have signed leases for 7 additional new stores to open in fiscal 2018 and beyond. We continue to monitor new store performance and remain comfortable with our targeted store openings.
As I noted, we are increasing our fiscal 2018 outlook for daily average comparable store sales growth and raising the low end of our earnings per share guidance.
During fiscal 2018, we expect to open 8 to 9 new stores, resulting in 6% unit growth; relocate 3 to 4 stores; achieve daily average comparable store sales growth of 4.5% to 5.5% compared to our prior outlook for 3.5% to 4.5% growth; achieve net income margin of 1.25% to 1.3%; achieve diluted earnings per share between $0.48 to $0.50 or a range of between $0.29 and $0.31 exclusive of the deferred tax benefit recognized during the first quarter. The low end of each of these ranges has been increased by $0.05. And we expect capital expenditures for fiscal 2018 in the range of $22 million to $25 million.
We are very pleased with our progress this year and are excited to be going into the fourth quarter with both sales and earnings momentum. We intend to continue executing the formula that has led to this year's improvement. Our 5 founding principles and our commitment to our valued customers, vendors and good4u crews continue to drive our focus and business forward. We pride ourselves on our quality and are vigilant to uphold our standards in every aspect of our stores. We do not just sell products simply because they sell. We sell products for a reason and to provide our customers healthy choices so that they can make informed decisions about their health.
These values remain our focus. We believe they set us apart from our competition and drive our growth and create value for our shareholders.
Now I would like to open the lines up for questions. Thank you.
Operator
(Operator Instructions) And our first question comes from Rupesh Parikh from Oppenheimer.
Rupesh Dhinoj Parikh - MD & Senior Analyst
So my first question. As you -- as we look at your performance quarter to date, is there any color you can provide in terms of what you're seeing from a comp perspective?
Kemper Isely - Chairman & Co-President
You mean for this quarter?
Rupesh Dhinoj Parikh - MD & Senior Analyst
Yes.
Kemper Isely - Chairman & Co-President
We're trending as we expect it to be, similar to -- yes, I mean, go ahead.
Rupesh Dhinoj Parikh - MD & Senior Analyst
Okay. And then on the direct store expense line, this quarter, we saw a much better leverage even with the lower comp than Q2. So I was curious what's driving that incremental leverage sequentially versus what we saw in Q2.
Kemper Isely - Chairman & Co-President
Todd, do you want to answer that?
Todd Dissinger - CFO
Yes. So we had lower marketing expenses in the store expense category. Depreciation was down. Some other expenses were down year-over-year. Store labor was about flat.
Rupesh Dhinoj Parikh - MD & Senior Analyst
Okay. And do you believe some of these improvements can continue into Q4?
Todd Dissinger - CFO
Yes.
Rupesh Dhinoj Parikh - MD & Senior Analyst
Okay. And then on the competitive front, obviously, during the quarter, Whole Foods was more aggressive with some of their new rollouts with Prime discounts and, I guess, the Amazon Prime now within your market, are you seeing any impact related to some of their efforts? And then I'm also curious there, clearly, is some -- I guess, dissent from some of the non-Prime members at Whole Foods and maybe some other customers that don't like their, I guess, lower standards that they have in stores. So I'm also curious if you're seeing any benefit from some of the changes that are happening at Whole Foods?
Kemper Isely - Chairman & Co-President
Well, in regards to Prime, we're not really seeing any significant effect on our sales because of their Prime initiatives. As far as dissatisfaction with their customers, it'd be hard for us to really quantitate that issue.
Operator
And our next question comes from Ryan Gilligan from Barclays.
Ryan J. Gilligan - Research Analyst
On the gross margin decline, can you break out how much of that was mix and how much was price investment?
Todd Dissinger - CFO
It was almost -- it was over half mix, so probably about 60% mix.
Ryan J. Gilligan - Research Analyst
Got it. Okay, that's helpful. And then, I guess, just where do you think you are in terms of price investments like what inning are we in? How much further price investment do you need to make before you feel comfortable with where you are from a pricing perspective?
Kemper Isely - Chairman & Co-President
I think we pretty well are -- I mean, we really cut the amount -- lower margin compared to a year ago in the last quarter, and we'll probably be similar in the next quarter. And then we'll probably have maybe a little bit of a positive effect in the first quarter of next year.
Ryan J. Gilligan - Research Analyst
That's helpful. And then on beer and wine, I think it's at a small amount of stores now, but can you just confirm what the impact was on comps if it was immaterial? And then also, I guess, just your thoughts on how many stores they can get to over time?
Kemper Isely - Chairman & Co-President
Well, at the moment, it's pretty immaterial. I think it was rolled out to some more, I think, 6 Oregon stores in July, so we didn't really have much of -- there was really no impact in the last quarter on our comp because of beer and wine. As far as future markets, as -- we'll analyze and see what is desirable for us as far as that goes as an investment into that category.
Operator
(Operator Instructions) And our next question comes from Bill Kirk from RBC Capital Markets.
William Joseph Kirk - Analyst
On the beer and wine topic, what changed philosophically to decide to start adding that to your stores?
Kemper Isely - Chairman & Co-President
Well, we added it in a very limited basis. I mean, we're -- the wines that we're selling has to be either organic or biologic. The beers are local craft beers and then we're selling some also hard cider, which is organic and then some kombucha with alcohol content that's organic. So there's quite a bit of demand for alcoholic beverages, and we thought that by offering a curated selection of high-quality organic wines and local craft beers in markets that have favorable regulations towards beer and wine would be of benefit to our customers.
William Joseph Kirk - Analyst
Okay. And a different question, maybe this is for Todd. But it looks like the CapEx was lowered for the full year. So maybe could you highlight what changed on your spending needs from that perspective?
Todd Dissinger - CFO
Sure. So there's one less new store in our guidance. And our CapEx this year versus last year was substantially lower. We did have some contingency built into our CapEx and some projects that we thought we might be funding were delayed. So that cushion was -- we took that out. We have good visibility into the rest of the year at this point.
Operator
(Operator Instructions) And our next question comes from Scott Mushkin from Wolfe Research.
Scott Andrew Mushkin - MD and Senior Retail & Staples Analyst
Just wanted to touch a little bit more on that SG&A line and, specifically, labor costs (inaudible) I think that it was flat year-over-year on labor expenses in dollars and I thought that, that could continue. I mean, obviously, some of your markets experiencing some pretty significant wage inflation. I was wondering if you could kind of give us insight into how that's going to happen. And I have a follow-up, please.
Kemper Isely - Chairman & Co-President
Well, we watch our labor budgets very carefully, and we believe that we can get higher labor productivity from our stores to offset higher labor costs in some of our markets.
Scott Andrew Mushkin - MD and Senior Retail & Staples Analyst
(inaudible) on the gross margin?
Kemper Isely - Chairman & Co-President
And then also, in regards to -- as our comp -- when our comp comes in at a nice level, it's also able -- I mean, that just helps the productivity of the labor quite a bit. I mean, that's why we think (inaudible).
Scott Andrew Mushkin - MD and Senior Retail & Staples Analyst
Oh, yes. I was just wondering how you (inaudible) flat dollars -- I was just curious how you get flat dollars.
Todd Dissinger - CFO
Well, just for clarification into the earlier question, the expenses that we talked about were all as a percent of sales, not dollars. Thank you for asking that.
Scott Andrew Mushkin - MD and Senior Retail & Staples Analyst
The gross margin -- we are tracking some pretty significant roll backs of pricing from Whole Foods, particularly in fresh? And I was just wondering if you guys have seen that and what do you think of that? What do you think market's reaction is over time? You're not just looking at your business, but just stepping back and looking at the market. They continue to -- we have pretty good information that they're going to be running at 25% discount next week for Prime members on vitamins. Just want to get your thought process as we move forward over time how you think the market develops and the pressures on the market?
Kemper Isely - Chairman & Co-President
Well, I mean, at 25% off for a week, they'll be at about our normal price on supplements. So good luck on that for them. We run our {N}power deals and get a little bit extra too, but we don't charge people to be members of our {N}power program. So it's -- yes, like I said, that's interesting, but their 25% off comes down to about what our everyday price is. Then as far as their fresh pricing goes, they've been overpriced for so long that it's about time that they joined the grocery wars where we are at for the last 30 years that we have been in business.
Operator
And the next question comes from Greg Badishkanian from Citi.
Garrett Klumpar - Associate
It's actually Garrett on for Greg. Just wanted to get your thoughts on inflation, what you're seeing by category and if that's changed materially since second quarter. And then are you still expecting kind of flat inflation for the year?
Kemper Isely - Chairman & Co-President
So far inflation has been pretty tame for the year. I think there's a certain amount of inflation and it's working its way through the market right now, with higher fuel costs and higher skill costs and higher inputs and material costs. And so that will probably start showing up towards the end of this year.
Garrett Klumpar - Associate
Okay, that's helpful. And then just switching gears to delivery. Could you give us an updated number on the locations offering Instacart. And then just any color around how the comps -- the Instacart comps are progressing sequentially?
Todd Dissinger - CFO
Sure. So we have 112 stores that are supported by Instacart as of the end of the quarter. And the volume with Instacart is just not material to be a driver in terms of our comp. And we've been adding so many stores on a year-over-year basis that -- it's hard to make a comparison over prior year's, but everything is sort of just ramping up.
Kemper Isely - Chairman & Co-President
The stores that have been on for a length of time are about flat in sales.
Operator
And our next question is a follow-up from Rupesh Parikh from Oppenheimer.
Rupesh Dhinoj Parikh - MD & Senior Analyst
Just 2 quick follow-ups. So on the private label front, I know that's been a bigger initiative of Natural Grocers. So I was just curious where you guys are with adding private label? And I guess, how are you thinking about it going forward?
Kemper Isely - Chairman & Co-President
We're steadily, by the month, adding new skus with private label. We're going to -- we're actually not -- though we're calling it private label, we're calling it the Natural Grocers brand, and we're going to officially launch the brand in September with a pretty good marketing campaign.
Rupesh Dhinoj Parikh - MD & Senior Analyst
Okay, great. And then the second question. Your {N}power program, it appears to, I think, continue to gain traction. So I was curious what you're seeing with the program and some of the bigger opportunities you see going forward.
Kemper Isely - Chairman & Co-President
Yes. I mean, we're adding about 20,000 to 25,000 members per month, and we're up over 600-and-some thousand members right now. The average ticket for the {N}power customers is substantially higher than the average ticket for our regular customers. And our marketing to our {N}power members is definitely helping us to drive sales.
Operator
And this concludes our question-and-answer session. I would now like to turn the conference back over to management for any closing remarks.
Kemper Isely - Chairman & Co-President
Thank you very much for joining us to discuss our third quarter results. We look forward to our 63rd anniversary celebration on August 16. Please visit any of our 147 stores to party like it's 1955. We look forward to speaking with you on our next call. Have a great day. Thank you.
Operator
The conference has now concluded. Thank you for attending today's presentation. You may now disconnect.